On 23 March 2007, Pakistan players and officials were questioned by Jamaican police and submitted DNA samples along with fingerprints, as part of the routine enquiries in the investigation into Woolmer's murder. Three days after leaving the West Indies for Pakistan, via London, the Pakistan team were ruled out as suspects. The deputy commissioner of Jamaican police. Mark Shields, the detective in charge of the investigation, announced, "It's fair to say they are now being treated as witnesses." "I have got no evidence to suggest it was anybody in the squad." A memorial service was held in Sacred Heart Church, Lahore, for Bob Woolmer on 1 April 2007. Among the attendees were Pakistan players and dignitaries, including Inzamam-ul-Haq, who was quoted as saying, "After Woolmer's family, the Pakistan team was the most aggrieved by his death." After the World Cup ended, serious doubts were raised about the investigation, with increasing speculation that Woolmer died of natural causes. This has now been accepted as fact, and the case has been closed.
A major controversy occurred in 2006 when the team toured England for a four-match Test series. England led the series 2-0 going into the final Test. In the first innings of that match, they were bowled out for 173 and Pakistan scored 504 in reply. In the second innings, after the dismissal of Alastair Cook for 83 off a reverse-swinging from Umar Gul, umpires Darrell Hair and Billy Doctrove called a halt to play as they adjudged Pakistan to be guilty of ball tampering. The ball was replaced and England was awarded 5 penalty runs. This event was the catalyst for the subsequent refusal to continue the match after tea by the Pakistan team. Based on the Laws of Cricket, the umpires declared Pakistan to have forfeited the game. The ICC later changed the result of the match to a draw, and subsequently reinstated the original result on 1 February 2009.
ICC regulations also allow cricketers who represent associate (i.e. non-Test-playing) nations to switch to a Test-playing nation, provided nationality requirements are fulfilled. In recent years, this has seen Irish internationals Ed Joyce, Boyd Rankin and Eoin Morgan switch to represent England, whilst Gavin Hamilton previously played for Scotland – though Joyce, Rankin and Hamilton were later able to re-qualify for and represent the countries of their birth.
In 2002, Pakistan participated in their second Asian Test Championship. It was originally planned to include all four Asian ICC full-members (Bangladesh, India, Pakistan and Sri Lanka). However, before the tournament started, India's participation was put in doubt. After defeating Bangladesh in the 1st Test to meet Sri Lanka in the final, they were defeated by them by 8 wickets.